On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study

Research output: Working paperPreprintResearch

Standard

On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study. / Wu, Haide; Hemmingsen, Lars Bo Stegeager; Sauer, Stephan P. A.

arxiv.org, 2023.

Research output: Working paperPreprintResearch

Harvard

Wu, H, Hemmingsen, LBS & Sauer, SPA 2023 'On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study' arxiv.org. https://doi.org/10.48550/arXiv.2312.13120

APA

Wu, H., Hemmingsen, L. B. S., & Sauer, S. P. A. (2023). On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study. arxiv.org. https://doi.org/10.48550/arXiv.2312.13120

Vancouver

Wu H, Hemmingsen LBS, Sauer SPA. On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study. arxiv.org. 2023 Dec 21. https://doi.org/10.48550/arXiv.2312.13120

Author

Wu, Haide ; Hemmingsen, Lars Bo Stegeager ; Sauer, Stephan P. A. / On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study. arxiv.org, 2023.

Bibtex

@techreport{dad9376a7dfc4a5cb6804fde0f8edc33,
title = "On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study",
abstract = "Thiolate containing mercury(II) complexes of the general formula [Hg(SR)n]2−n have been of great interest since the toxicity of mercury was recognized. 199Hg nuclear magnetic resonance spectroscopy (NMR) is a powerful tool for characterization of mercury complexes. In this work, the Hg shielding constants in a series of [Hg(SR)n]2−n complexes are therefore investigated computationally with particular emphasis on their geometry dependence. Geometry optimizations and NMR chemical shift calculations are performed at the density functional theory (DFT) level with both the zeroth-order regular approximation (ZORA) and four-component relativistic methods. The four exchange-correlation (XC) functionals PBE0, PBE, B3LYP and BLYP are used in combination with either Dyall{\textquoteright}s Gaussian-type (GTO) or Slater-type orbitals (STOs) basis sets. Comparing ZORA and four-component calculations, one observes that the calculated shielding constants for a given molecular geometry have a constant difference of ∼1070 ppm. This confirms that ZORA is an acceptable relativistic method to compute NMR chemical shifts. The combinations of 4-component/PBE0/v3z and ZORA/PBE0/QZ4P are applied to explore the geometry dependence of the isotropic shielding. For a given coordination number the distance between mercury and sulfur is the key factor affecting the shielding constant, while changes in bond and dihedral angles and even different side groups have relatively little impact.",
keywords = "Faculty of Science, NMR, mercury, ZORA, Relativistic Effects, 4-Component Calculations, Density Functional Theory",
author = "Haide Wu and Hemmingsen, {Lars Bo Stegeager} and Sauer, {Stephan P. A.}",
year = "2023",
month = dec,
day = "21",
doi = "10.48550/arXiv.2312.13120",
language = "English",
volume = "2312.13120",
publisher = "arxiv.org",
type = "WorkingPaper",
institution = "arxiv.org",

}

RIS

TY - UNPB

T1 - On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study

AU - Wu, Haide

AU - Hemmingsen, Lars Bo Stegeager

AU - Sauer, Stephan P. A.

PY - 2023/12/21

Y1 - 2023/12/21

N2 - Thiolate containing mercury(II) complexes of the general formula [Hg(SR)n]2−n have been of great interest since the toxicity of mercury was recognized. 199Hg nuclear magnetic resonance spectroscopy (NMR) is a powerful tool for characterization of mercury complexes. In this work, the Hg shielding constants in a series of [Hg(SR)n]2−n complexes are therefore investigated computationally with particular emphasis on their geometry dependence. Geometry optimizations and NMR chemical shift calculations are performed at the density functional theory (DFT) level with both the zeroth-order regular approximation (ZORA) and four-component relativistic methods. The four exchange-correlation (XC) functionals PBE0, PBE, B3LYP and BLYP are used in combination with either Dyall’s Gaussian-type (GTO) or Slater-type orbitals (STOs) basis sets. Comparing ZORA and four-component calculations, one observes that the calculated shielding constants for a given molecular geometry have a constant difference of ∼1070 ppm. This confirms that ZORA is an acceptable relativistic method to compute NMR chemical shifts. The combinations of 4-component/PBE0/v3z and ZORA/PBE0/QZ4P are applied to explore the geometry dependence of the isotropic shielding. For a given coordination number the distance between mercury and sulfur is the key factor affecting the shielding constant, while changes in bond and dihedral angles and even different side groups have relatively little impact.

AB - Thiolate containing mercury(II) complexes of the general formula [Hg(SR)n]2−n have been of great interest since the toxicity of mercury was recognized. 199Hg nuclear magnetic resonance spectroscopy (NMR) is a powerful tool for characterization of mercury complexes. In this work, the Hg shielding constants in a series of [Hg(SR)n]2−n complexes are therefore investigated computationally with particular emphasis on their geometry dependence. Geometry optimizations and NMR chemical shift calculations are performed at the density functional theory (DFT) level with both the zeroth-order regular approximation (ZORA) and four-component relativistic methods. The four exchange-correlation (XC) functionals PBE0, PBE, B3LYP and BLYP are used in combination with either Dyall’s Gaussian-type (GTO) or Slater-type orbitals (STOs) basis sets. Comparing ZORA and four-component calculations, one observes that the calculated shielding constants for a given molecular geometry have a constant difference of ∼1070 ppm. This confirms that ZORA is an acceptable relativistic method to compute NMR chemical shifts. The combinations of 4-component/PBE0/v3z and ZORA/PBE0/QZ4P are applied to explore the geometry dependence of the isotropic shielding. For a given coordination number the distance between mercury and sulfur is the key factor affecting the shielding constant, while changes in bond and dihedral angles and even different side groups have relatively little impact.

KW - Faculty of Science

KW - NMR

KW - mercury

KW - ZORA

KW - Relativistic Effects

KW - 4-Component Calculations

KW - Density Functional Theory

U2 - 10.48550/arXiv.2312.13120

DO - 10.48550/arXiv.2312.13120

M3 - Preprint

VL - 2312.13120

BT - On the Geometry Dependence of the NMR Chemical Shift of Mercury in Thiolate Complexes: A Relativistic DFT Study

PB - arxiv.org

ER -

ID: 376995200